BPS

Database of RNA Base-pair Structures

Base-pairing pattern A·C: AC_5

Ac_5

Examples

  • In higher-resolution structures (≤ 3.0 Å): 89
  • In all structures: 264

Higher-resolution structures

  • Hydrogen-bonding pattern
  • Bond A C Length Ave Length Std Attribute
    1 N1 N4 3.04 0.23 T

  • Base-pair parameters
  • Stats Shear Stretch Stagger Buckle Propeller Opening
    Average 3.71 0.23 -0.11 -12.65 -11.15 -23.23
    std 1.56 0.40 0.94 12.09 11.90 40.41

  • Isosteric parameters
  • Stats λI λII C1′_C1′
    Average 62.27 30.06 11.66
    Std 13.89 19.04 1.45
  • Structure context (A/C)
  • Conformation Context Number
    Helix H 31
    H/H H/H 4
    H/S H/S_hq 1
    Helix H_e 2
    Helix H_qe 2
    H/H H_qe/H_qe 1
    S/H S_b/H 12
    S/H S_b/H_qe 28
    S/H S_l/H 8